Hi,
At this moment, I will recommend you the plugin "shipping price per product".
There is a feature which allow you to "block" a product for a specific shipping method.
By activating this option in your shipping configuration (manual shipping working better) you can afterwards configure prices for the shipping in the product edition (in the back-end, the plugin is not compatible with the front-end, for the moment).
This plugin has to be right published and contains a column "block" in order to forbidden a product for a specific shipping method.
If you have shipping methods per country (per zones), you can at this moment exclude a product for some shipping methods so, for some zones.
I think it will be easier for you to configure the system like that.
Regards,
Jerome - Obsidev.com
HikaMarket & HikaSerial developer / HikaShop core dev team.
Also helping the HikaShop support team when having some time or couldn't sleep.
By the way, do not send me private message, use the "contact us" form instead.